progeny software

Product Updates - Progeny 7 Release Notes

 

PROGENY 7.1.03 UPDATE
New Features

  • Users can now set the number of days until user’s password expires
  • Users can now lock out users that have not logged into the database within a specified number of days

Fixes

  • Certain display fields for barcode printing were not saving and printing properly
  • Batch aliquot creation was adding all aliquots to the first sample
  • Users could not save changes to alias names for markers
  • Plate viewer queries were not displaying if a individual level computed field was in the smart list
  • Marker import updates were stopping if a non-numeric character was in either the bp or cM columns.
  • Using the Sample Count system field in symbols would not display properly

 

PROGENY 7.1.02 UPDATE
New Features

  • Users can now view and filter all Chain of Custody records
  • New Container Types - Building, Room, Custom 2, 3, 4, 5
  • Print reactions can now include individual level fields
  • The Scan window now has a calendar option for date fields
  • The Scan window was expanded to allow for more room for error messages and display fields
  • Custom marker imports now allow users to specify a delimiter when importing Allele AB values

Fixes

  • Haplotypes were not saving in the pedigree if large amounts of markers were displayed
  • The IN query operator was not working in select cases
  • Haploview exports were generating an Info file error in some cases
  • Family Based Association exports were exporting properly when using a non-system field as the Unique ID
  • Sample Name was not accessible as a system field in the pedigree

 

PROGENY 7.1.01 UPDATE
Fixes

  • Workflows now have circular arrows when stages have themselves as next stages
  • Databases were not allowing access to users other than ‘progeny’ while using a mobile device
  • Databases with negative genotype error counts are now corrected

 

PROGENY 7.0.00 - 7.1.00 UPDATE
New Features

  • Workflows Navigation Bar was added
  • Workflows now allow the user to name the stage, choose the action and set the protocol
  • Workflows stages display the samples currently in that stage and allow for batch processing
  • Add Aliquot reaction now allows for multiple aliquots to be drawn from a sample in the same action
  • Users can now copy plates
  • LIMS users can now customize the Container Structure through Container Maintenance
  • Actions can now be run from the Sample Data Sheet
  • The Chain of Custody tab was reordered and now displays if the action was a part of a workflow
  • A new system reaction for Assigning a Sample to an Individual was added
  • Add Aliquot reaction now allows for the user to specify fields to inherit data from the parent sample
  • Actions can now be run from the Sample Spreadsheet
  • Users can now set the font size and scale for Barcode Label printing
  • Actions can now be set to only run once per sample
  • The Custom Genotype export now has the ability to export relationship information in linkage form
  • Genotype imports now allow you to specify Custom Allele Values for AA, AB, BB
  • The Custom Genotype export now has an option to export additional phenotype fields
  • Analysis exports now allow you to choose sub-pedigrees for data export
  • HelixTree exports can now create a project, add to existing project or just create the files
  • Data Sheets now populate on demand, large data sheets should see substantial speed improvements
  • All Queries now have the ability to search over a comma separated list using the IN or NOT IN function
  • The Add Sample window in the pedigree and individual navigations now lock to the selected individual
  • Fill options within the Spreadsheet were added to the right click menu
  • Show fieldtype, header and border are now defaulted on in the data sheet
  • Added a full help menu to all Navigation bars
  • The pedigree can now separate the Subtext Legend and the Marker Legend
  • Individuals within the pedigree now have a default Individual Name of Pedigree_UPN

FIXES

  • Autosize Subtext was not accounting for the Haplotype bars in the pedigree
  • Computed fields were not displaying correctly in the Scan window
  • A fix was made to the Active Connections option to view connetions to the current database only
  • The menu for setting inferred status in the pedigree was displaying incorrectly
  • The Haploview export was not handling table fields correctly
  • Plate Exports were not handling barcode and container name system fields
  • A fix was made to the Login screen to handle large database paths
  • Actions with a print reaction were not able to be default actions
  • Users were not able to change the name of a plate
  • A fix was made to the Mendelian Error checking in the Genotype Imports
  • Context searching was not handling pedigree name in Samples
  • An update was made to the counting of sample during an import
  • A fix was made to allow for data to be updated on tables with auditing turned on
  • The pedigree was not setting the page count correctly
  • Running Fit to Page in the pedigree was causing an incorrect display
  • Remove an Individual from a Pedigree was leaving relationship information
  • If a user Removed an Individual from a pedigree, you must save the change before it is created
  • Spreadsheets were not querying correct on table subfields
  • There was a problem with populating data sheets for Shortcuts
  • A change was made to populate the correct name for individuals in the Add Sample window
  • Lookup Tables were not correctly handing hyperlink fields
  • Data Sheets were not correctly saving the default settings
  • Table Summary fields were not saving correctly
  • Replace All in the Spreadsheet was causing a crash if the find value was empty
  • A change was made to Clear Genotypes to handle additional cases
  • Spreadsheet imports into tables was not aligning correctly
  • Merlin, FBAT, and PLINK exports were not handling marker break overlaps correctly
  • Summary and Table Summary fields were not displaying correctly in Field Maintenance
  • Marker imports were forcing Allele Values to lowercase in one column per call imports
  • The Fields window in the Spreadsheet was renumbering incorrectly when you drag a column to change the order
  • Marker imports were not handling delimiters with more than one character
  • Custom Genotype exports were not saving the query within selected individuals criteria
  • Haplotype values were not editable once the Icons slider was opened
  • Copying fields and added text between data sheets was not handling returns in the data
  • The login screen was not allowing a connection after an attempted connection failed
  • Data Sheets were allowing Select All in data entry mode
  • BRCA exports were not exporting correctly
  • Box viewer was not drawing the wells correctly
  • Imports were counting the header row in the total number of individuals imported
  • The Freezer navigation was not populating based upon Sample security
  • Integrated Login was not working correctly and is now preventing login to local databases
  • A new genotype rejected error was put in for samples that are not tied to individuals
  • PLINK export was assigning a gender to unknown gender individuals
  • Clear Genotypes was not displaying the Individual Name properly
  • The program was closing if the user opened 8 or more data sheets
  • Remove from Container system reaction is now clearing the Position data
  • Copy Individual was not copying the Individual Name
  • Icon Subtext set to display above the icon was not displaying properly
  • Symbol set to use Gender were not displaying correctly
  • Data Sheet image fields were not displaying in high resolution
  • Plate printing was improved to fit on a page, display the wells, and split pages correctly on large plates
  • The counts of very large Genotype imports were displaying negative numbers
  • Data Sheet added text was not importing properly on XML imports


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