Bug Fixes

  • Changes to datasheet tables do not get saved to the database in Google Chrome

Bug Fixes

  • Smart draw still causes pedigrees to allocate too much vertical space even when subtext lines do not support it
  • Actions/workflows with reactions linked to Yes/No fields do not allow workflow or action to get past a reaction with that field
  • When you run smart draw on a pedigree it ignores dimensions and makes generation gap taller than it should be
  • Invalid menu options display if user begins typing text in a hyperlink field before menu to the right appears
  • Right click menu to open sample datasheet in plate/container viewer does nothing
  • The system does not display one of the individuals in the individual listing page when a new individual is added to the smart list
  • Users are able to delete or save spreadsheet formats even though security permissions do not allow
  • Clicking hyperlink to open pedigree in Firefox causes a JavaScript error to be displayed sometimes
  • Father ID does not display in the pedigree members smart list
  • Gender now displays as M/F/U for Male, Female or Unknown respectively, in smart lists, spreadsheets and spreadsheet exports
  • Subtext added to individual on the lowest level the text is cut off by the window
  • In web data capture module pedigree viewer, ensure male on left; currently grandparents have female on left
  • In web data capture module, update deceased status on the pedigree viewer immediately after the change is made in the datasheet

Enhancements/Features

  • Allow copying, scrolling and other non-edit functions in otherwise non-editable fields such as system fields, calculated fields and locked datasheet fields in read only mode
  • Use mouse over on hyperlink fields to popup a menu to open/view or download the document if field has value
  • Replaced document upload menu with a button that is part of the hyperlink/document field editor
  • Add validations to document management so that :-
    1. Existing files can be renamed by changing name of document in datasheet or spreadsheet
    2. If name entered in datasheet refers to a non-existing document system must reject it
    3. Value can be changed from document name to absolute URL, email link or to an empty value
  • Redesign login screen to remove login links from signup page
  • Add prompts to login/sign up page for web data capture module
  • Create administration screen to delete unwanted users from the web data capture module
  • Add configuration screen to enable family interview screen to be first page user sees when they sign up for family history study
  • Added ability to draw hooks on line intersections in web pedigrees
  • In web data capture module, make deceased status system field editable and update marker on pedigree in real-time
  • Web data capture module, users can now add cousins and half-siblings through a new popup on the family table page

Enhancements

  • SYNC – Add Progeny Sync functionality
  • MAIN – enable the status bars to give a count of total items in a list and selected items in a list
  • MAIN – ability to batch select fields when adding columns to a smart list in the main screen
  • AUDIT – A record of deleted items (pedigrees, individuals, and samples) is now stored so that the audit trail can be viewed for deleted items
  • PED/IND – Optimize the copy pedigree operation so that it makes less calls to the DB when copying markers
  • ACTIONS – ability to batch select fields in the field chooser for display fields
  • REACTIONS – ability to batch select fields in the field chooser for inherited fields in a create aliquot reaction
  • REACTIONS – allow users to specify a default printer for a print reaction; one that is NOT the default printer for the PC
  • REACTIONS – Have a naming default for Create Sample reaction to allow for SCANNING samples into the database instead of autoincrementing (No Default)
  • CONTAINERS – change well positions from “A1, A2″ to “A01, A02″
  • PLATES – Include the plate name when you print the lay-out of the plate viewer

Fixes

  • FIELDS – Progeny takes 15 min to update drop down in  fields module
  • FIELDS – Editing of the table structure for a Table Field causes the DB to error.
  • FIELDS – Add Field and Edit Field windows are not sized properly when you set the res to 125%
  • REPORTING – System field “Order Number” causes a DB error when you try to run it
  • REPORTING – Every time you click a report tab, it launches the “Report Setup” window unnecessarily
  • REPORTING – Change Field does not seem to work
  • MAIN – Merge Pedigree not populating pedigrees in the pedigree chooser if you are not logged in as progeny
  • SEARCH – Markers Module, search for a marker doesn’t seem to be working.
  • IND – copying individuals is crashing if you have the Open on Save checkbox checked
  • PED/IND – Load from Txt – cannot load data sheet into folder that already has a data sheet saved
  • PED – the first time you click on marker data to edit it in the subtext, nothing happens
  • PED – enable “save as image” in the pedigree to print pedigree relationships exactly as they appear on screen
  • PED – scrolling in the pedigree takes away the ability to edit marker data and change the color bars
  • SAMPLES – Dates are not formatted properly in the Chain of Custody list in the Samples module
  • SCAN – “Browse…” option not enabled for hyperlinks in scan mode
  • SCAN – If the default/specified printer fails to get initialized, show an error and then prompt the user to choose a printer
  • REACTIONS – Add Reaction and Edit Reaction windows are not sized properly when you set the res to 125%
  • IDS – Pedigree Data Fields are not properly labeled in the properties window if you add them to an Individual Data Sheet
  • PLATES – security was not getting set up properly in the conversion to Progeny 8

Bug Fixes

  • Workflows with Yes/No fields get stuck on those fields preventing actions from being completed
  • Tabbing from one field to another in datasheets causes the screen to scroll unnecessarily

Bug Fixes

  • Invalid menu options display if begin typing text in a hyperlink field before menu to the right appears
  • Smart draw  causes pedigrees to allocate too much vertical space even when subtext lines do not support it
  • New individual window must pre-populate selected folder even when folder is a subfolder of another
  • Reaction disappears from list when editing the preceding reaction in the list
  • Uploads done from tables do not get saved in the database even after the file is uploaded
  • Add more visual cues to license request window to show when the server failed to send email to register@progenygenetics.com
  • Cannot update table date sub fields in a spreadsheet
  • Inserting table row does not work when you have more than one table in the spreadsheet
  • Proband icon not being rendered on pedigree drawing unless selected
  • Change status to deceased in family history module pedigree drawing throws uncaught error
  • Configuration changes are now saved when typing in email responses and user hits enter to go to next line
  • Fix tab orders on family history data entry table

Enhancements/Features

  • Draw sample/genotype status icons on pedigrees
  • Prompt to replace if file already exists on server when uploading documents
  • Use open on save in new individual window
  • Add ability to change samples names
  • Render Yes/No fields as checkboxes inside tables and spreadsheets as opposed to rendering as dropdown fields
  • Add support of browser back and forward buttons when navigating family history module

Fixes

  • WKFL – When you reset a sample to a workflow by way of a stage in that workflow, it does not remove the sample from the stage (gives the ability to reset a sample to the beginning of a workflow)
  • Scan Mode was not allowing you to assign a sample to an individual if you were using a non-System Field
  • Custom Linkage export needs to zero out a person’s parent IDs if the parents are not included in the export
  • The sample status box in the pedigree is not displaying the correct color
  • In the spreadsheet export it was not correctly formatting returns and newlines in all cases
  • Affymetrix genotype imports were causing Progeny to crash
  • The System Field Container Barcode was causing a database error if you include it in the Query
  • Individual table fields were allowed to be added to a Sample spreadsheet causing errors when you run the spreadsheet
  • Sorting a table in a datasheet by a computed field was causing the data to disappear
  • Imports and exports (specifically in the spreadsheet) were not handling commas in csv files properly
  • The System Fields Last Modified and Modified By were causing speed issues wherever they were used (mostly in the pedigree smartlist)
  • Copying fields from one datasheet tab to another can generate duplicate tab order numbers, and those fields will be skipped in the tab order
  • The System Field Container Path was causing database errors in new databases
  • Chain of custody audit was not formatting dates properly
  • Every time you add a new container through the Inventory module, a new folder named “Added Plates” gets added in the Containers module
  • Cannot move icons on the pedigree when you have One Click Add enabled
  • Create Samples through the Pedigree Import was not creating samples
  • The database connection was dropping if you created more than 48 fields in the Fields module
  • The Allegro export was not exporting the frequency if a marker had no calls whatsoever
  • System generated folders and containers were not getting added to the trees, and would require restarting Progeny to see them.  Same for deleted containers
  • In some cases the Save as Txt functionality was encountering a database error when exporting marker data

Enhancements

  • Added the ability to select multiple containers so you can drag and delete them in the Containers module
  • Changed the sub pedigree icon so that it will stand out more against the regular pedigree icon
  • Added a System field for Pedigree (and Individual) Folder Path
  • Progeny Sync functionality added that will allow users to Synchronize folders between two databases

Bug Fixes

  • Datasheets – Field labels are not consistently positioned and/or aligned
  • Date Fields – Dates for USA locales are not displaying properly, showing year/month/day instead of the US style date format

Bug Fixes

  • Datasheets – Database error when trying to insert rows in some datasheet tables
  • Datasheets – Hyperlink fields do not update right away when document is uploaded
  • Datasheets – Datasheets opened from shortcuts have not title/name in the datasheet tab
  • Datasheets – Added text is not displayed in sample datasheets and pedigree datasheets
  • Datasheets – Checkbox labels are not displayed on the right side of checkbox
  • Hyperlinks – Document management is now included in hyperlink fields
  • Checkboxes – Yes no fields now rendered and edited as checkboxes in tables and spreadsheets

Bug Fix

  • Datasheets – Database error when trying to insert rows in some datasheet tables

Fixes

  • Spreadsheet -  In the “toggled” pedigree spreadsheet when you click “Fields” nothing happens.
  • Datasheet – There’s a crash when “back tabbing” in an Individual Datasheet table with a single column
  • Auditing – System crashes when you right-click in the blank space of a field audit report and select “Field Audit Report…” from the dropdown
  • Pedigree – Icon symbols are applying the wrong symbols for the last symbol in the symbols list
  • Spreadsheet – Cannot slow click on the Query edit boxes for values to edit the values Auditing – Fill Left and Fill right option under right click menu in the Field Audit Report
  • Tasks – Progeny crashes when launching open sample datasheet for a sample within a task Auditing – Fix the SQL for the sample audit status system field
  • Datasheet -  Conditionally show the Field Audit Report menu on datasheet fields
  • Pedigree – Toggle spreadsheet gives database error when System Field Sample Name is added to the format
  • Sample Auditing – Instant Crash with error when turning on auditing for a sample XML – XML import will fail sometimes if the file does not contain an individual name for each person
  • Database – Unable to convert database version from Progeny 7 to Progeny 8.

New Features

  • Fields – New system fields for Primary Sample, modified date, modified by, created date and created by for
    Individuals, Samples, and Markers
  • Pedigree – Ability to select multiple degrees of relation by holding the SHIFT or CTRL key in the pedigree
  • Import – Import containers and update locations automatically
  • Datasheet – Enable users to view the entire field name path to be able to identify fields on the data sheet
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