A B C D E F G I L M P R S T V W X

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SAMPLE_AUDIT_STATUS - Static variable in class com.objex.progeny.anywhere.fields.XRFSystemField

Fieldid for Sample Audit Status field

SAMPLE_FOLDER - Static variable in class com.objex.progeny.anywhere.fields.XRFSystemField

Fieldid for container name

SAMPLE_NAME - Static variable in class com.objex.progeny.anywhere.fields.XRFSystemField

Fieldid for Sample Name field

SAMPLE_STATUS - Static variable in class com.objex.progeny.anywhere.fields.XRFSystemField

Fieldid for Sample Status field

SDS_CONTEXT - Static variable in class com.objex.progeny.anywhere.fields.FieldContext

Sample Field context

setAlias(String) - Method in class com.objex.progeny.anywhere.data.ChromosomeMarker

Sets a new alias for the marker

setAlias(String) - Method in class com.objex.progeny.anywhere.data.MarkerLegendItem

Sets a new alias for the marker legend item.

setBasePairs(double) - Method in class com.objex.progeny.anywhere.data.ChromosomeMarker

Set the genetic distance for this marker base pairs

setBasePairs(double) - Method in class com.objex.progeny.anywhere.data.MarkerLegendItem

Set the genetic distance for this marker base pairs

setBottomBar(boolean) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property bottomBar.

setChromoItems(Map<Integer, ChromosomeLegendItem>) - Method in class com.objex.progeny.anywhere.data.MarkerLegend

Sets a new map of chromosome legend items keyed by sequence ID.

setChromosomes(Map<Integer, Chromosome>) - Method in class com.objex.progeny.anywhere.data.MarkerData

Sets a new map of chromosomes keyed by chromosome ID.

setCM(double) - Method in class com.objex.progeny.anywhere.data.ChromosomeMarker

Set the genetic distance for this marker cM

setCM(double) - Method in class com.objex.progeny.anywhere.data.MarkerLegendItem

Set the genetic distance for of the marker to which this legend item is linked.

setColor(long) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property color.

setColor(long, boolean) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property color.

setColor(Paint) - Method in class com.objex.progeny.anywhere.data.Allele

Set the new color for this Allel e

setColor(int) - Method in class com.objex.progeny.anywhere.legend.symbols.XRFSymbolsLegendItem

setColorManuallyAssigned(boolean) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property colorManuallyAssigned.

setColumn(int) - Method in class com.objex.progeny.anywhere.legend.subtext.XRFSubtextLegendItem

setColumns(List<XRFSubtextLegendItem>) - Method in class com.objex.progeny.anywhere.legend.subtext.XRFSubtextLegendItem.Row

setCompareValue(XRFData) - Method in class com.objex.progeny.anywhere.legend.symbols.XRFSymbolsLegendItem

setConstraintViolation(String) - Method in class com.objex.progeny.anywhere.fields.data.XRFDateFieldData

setConstraintViolation(String) - Method in class com.objex.progeny.anywhere.fields.data.XRFDoubleFieldData

setConstraintViolation(String) - Method in class com.objex.progeny.anywhere.fields.data.XRFIntegerFieldData

setConstraintViolation(String) - Method in class com.objex.progeny.anywhere.fields.data.XRFTextFieldData

setContext(int) - Method in class com.objex.progeny.anywhere.fields.FieldContext

setData(XRFCustomData) - Method in class com.objex.progeny.anywhere.data.DataTRF

setData(Map<Integer, Map<Integer, Map<Integer, XRFData>>>) - Method in class com.objex.progeny.anywhere.data.XRFCustomData

setData(Map) - Method in class com.objex.progeny.anywhere.fields.data.XRFTableData.Row

setDataValue(Object) - Method in interface com.objex.progeny.anywhere.fields.data.XRFData

setDataValue(Object) - Method in class com.objex.progeny.anywhere.fields.data.XRFDateFieldData

setDataValue(Date) - Method in class com.objex.progeny.anywhere.fields.data.XRFDateFieldData

setDataValue(Double) - Method in class com.objex.progeny.anywhere.fields.data.XRFDoubleFieldData

setDataValue(Object) - Method in class com.objex.progeny.anywhere.fields.data.XRFDoubleFieldData

setDataValue(Object) - Method in class com.objex.progeny.anywhere.fields.data.XRFIntegerFieldData

setDataValue(Integer) - Method in class com.objex.progeny.anywhere.fields.data.XRFIntegerFieldData

setDataValue(Object) - Method in class com.objex.progeny.anywhere.fields.data.XRFTableData

setDataValue(Object) - Method in class com.objex.progeny.anywhere.fields.data.XRFTextFieldData

setDataValue(String) - Method in class com.objex.progeny.anywhere.fields.data.XRFTextFieldData

setDefaultWidth(int) - Method in interface com.objex.progeny.anywhere.fields.XRFField

Set the default width for the field.

setDefaultWidth(int) - Method in class com.objex.progeny.anywhere.fields.XRFIDSDataField

setDeleted(boolean) - Method in class com.objex.progeny.anywhere.fields.data.XRFTableData.Row

Set this flag to TRUE if the row was deleted from the UI table and may need to be deleted from the database too.

setDirty(boolean) - Method in class com.objex.progeny.anywhere.fields.data.XRFTableData.Row

setDropdownValues(String[]) - Method in class com.objex.progeny.anywhere.fields.XRFDropdownField

setDropdownValues(String[]) - Method in interface com.objex.progeny.anywhere.fields.XRFField

setDropdownValues(String[]) - Method in class com.objex.progeny.anywhere.fields.XRFIDSDataField

setField(XRFField) - Method in interface com.objex.progeny.anywhere.fields.data.XRFData

setField(XRFField) - Method in class com.objex.progeny.anywhere.fields.data.XRFFieldData

setField(XRFField) - Method in class com.objex.progeny.anywhere.fields.data.XRFTableData

Assigns the Table XRFField to which this XRFTableData relates to aTableField.

setField(XRFField) - Method in class com.objex.progeny.anywhere.legend.subtext.XRFSubtextLegendItem

setField(XRFField) - Method in class com.objex.progeny.anywhere.legend.symbols.XRFSymbolsLegendItem

setFieldid(int) - Method in class com.objex.progeny.anywhere.data.MarkerLegendItem

Set the ID of the marker to which this legend item is linked.

setFieldid(int) - Method in interface com.objex.progeny.anywhere.fields.XRFField

setFieldid(int) - Method in class com.objex.progeny.anywhere.fields.XRFIDSDataField

setFieldname(String) - Method in interface com.objex.progeny.anywhere.fields.XRFField

setFieldname(String) - Method in class com.objex.progeny.anywhere.fields.XRFIDSDataField

setFieldtype(XRFFieldType) - Method in interface com.objex.progeny.anywhere.fields.XRFField

setFieldtype(XRFFieldType) - Method in class com.objex.progeny.anywhere.fields.XRFIDSDataField

setGenetic_distance(double) - Method in class com.objex.progeny.anywhere.data.ChromosomeMarker

Setter for property genetic_distance.

setHatch(int) - Method in class com.objex.progeny.anywhere.data.Allele

Set the value of the hatch property.

setHeight(double) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property height.

setHeight(int) - Method in class com.objex.progeny.anywhere.legend.symbols.XRFSymbolsLegend

setIconX(double) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property iconX.

setIconY(double) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property iconY.

setID(String) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property ID.

setId(int) - Method in class com.objex.progeny.anywhere.data.Chromosome

Sets a new ID for the chromosome

setId(int) - Method in class com.objex.progeny.anywhere.data.ChromosomeLegendItem

Set the ID of the chromosome legend item.

setId(int) - Method in class com.objex.progeny.anywhere.data.XRFFolder

Setter for property id.

setId(int) - Method in class com.objex.progeny.anywhere.legend.subtext.XRFSubtextLegendItem.Row

setIndet(boolean) - Method in class com.objex.progeny.anywhere.data.Allele

setInfer(boolean) - Method in class com.objex.progeny.anywhere.data.Allele

Set to true if value if inferred.

setItems(List<XRFSubtextLegendItem>) - Method in class com.objex.progeny.anywhere.legend.subtext.XRFSubtextLegend

setItems(List<XRFSymbolsLegendItem>) - Method in class com.objex.progeny.anywhere.legend.symbols.XRFSymbolsLegend

setLegendDisplayText(String) - Method in class com.objex.progeny.anywhere.data.MarkerLegendItem

Set the text that will be displayed on the legend.

setLegendDisplayText(String) - Method in class com.objex.progeny.anywhere.legend.subtext.XRFSubtextLegendItem

setLocation(double) - Method in class com.objex.progeny.anywhere.data.ChromosomeMarker

Setter for property location.

setLookupTableInfo(XRFLookupTableInfo) - Method in interface com.objex.progeny.anywhere.fields.XRFField

setLookupTableInfo(XRFLookupTableInfo) - Method in class com.objex.progeny.anywhere.fields.XRFIDSDataField

setLookupTableInfo(XRFLookupTableInfo) - Method in class com.objex.progeny.anywhere.fields.XRFIDSLookupTableField

setLookupTableInfo(XRFLookupTableInfo) - Method in interface com.objex.progeny.anywhere.fields.XRFLookupTableField

setMarkerItems(Map<String, MarkerLegendItem>) - Method in class com.objex.progeny.anywhere.data.ChromosomeLegendItem

Set a new map/list of marker legend items

setMarkers(Map<String, ChromosomeMarker>) - Method in class com.objex.progeny.anywhere.data.Chromosome

Set the list/map of markers for this chromosome.

setMaternalAllele(Allele) - Method in class com.objex.progeny.anywhere.data.ChromosomeMarker

Set the maternal allele to specified value

setMaxtablerowcount(int) - Method in class com.objex.progeny.anywhere.legend.subtext.XRFSubtextLegendItem

setModified(boolean) - Method in class com.objex.progeny.anywhere.fields.data.XRFFieldData

setModified(boolean) - Method in class com.objex.progeny.anywhere.fields.data.XRFTableData

setName(String) - Method in class com.objex.progeny.anywhere.data.Chromosome

Setter for property name.

setName(String) - Method in class com.objex.progeny.anywhere.data.ChromosomeLegendItem

Setter for property name.

setName(String) - Method in class com.objex.progeny.anywhere.data.ChromosomeMarker

Setter for property name.

setName(String) - Method in class com.objex.progeny.anywhere.data.MarkerLegendItem

Setter for property name.

setName(String) - Method in class com.objex.progeny.anywhere.data.XRFFolder

Setter for property name.

setNewrec(boolean) - Method in class com.objex.progeny.anywhere.fields.data.XRFTableData.Row

setNextMarkerSequence(int) - Method in class com.objex.progeny.anywhere.data.Chromosome

Setter for property nextMarkerSequence.

setNextMarkerSequence(int) - Method in class com.objex.progeny.anywhere.data.ChromosomeLegendItem

Setter for property nextMarkerSequence.

setOp(CompareOperator) - Method in class com.objex.progeny.anywhere.legend.symbols.XRFSymbolsLegendItem

setParent(XRFFolder) - Method in class com.objex.progeny.anywhere.data.XRFFolder

Setter for property parent.

setPaternalAllele(Allele) - Method in class com.objex.progeny.anywhere.data.ChromosomeMarker

Set the parternal allele.

setPaternity(String) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property paternity.

setRgb(boolean) - Method in class com.objex.progeny.anywhere.data.Allele

Set the RGB flag

setRow(int) - Method in class com.objex.progeny.anywhere.legend.subtext.XRFSubtextLegendItem

setRows(Map<Integer, XRFTableData.Row>) - Method in class com.objex.progeny.anywhere.fields.data.XRFTableData

Set the rows property to the elements of supplied Map.

setRrn(int) - Method in class com.objex.progeny.anywhere.fields.data.XRFTableData.Row

setSequence(int) - Method in class com.objex.progeny.anywhere.data.ChromosomeMarker

Setter for property sequence.

setSequence(int) - Method in class com.objex.progeny.anywhere.data.MarkerLegendItem

Setter for property sequence.

setSubfield(XRFField, int) - Method in class com.objex.progeny.anywhere.fields.XRFIDSLookupTableField

Add a subfield to the subfields array at specified index.

setSubfield(XRFField, int) - Method in class com.objex.progeny.anywhere.fields.XRFTableField

Add a subfield to the subfields array at specified index.

setSubfields(XRFField[]) - Method in interface com.objex.progeny.anywhere.fields.XRFField

setSubfields(XRFField[]) - Method in class com.objex.progeny.anywhere.fields.XRFIDSDataField

setSubfields(XRFField[]) - Method in class com.objex.progeny.anywhere.fields.XRFIDSLookupTableField

setSubfields(XRFField[]) - Method in class com.objex.progeny.anywhere.fields.XRFTableField

setSubitems(Map<Integer, XRFSubtextLegendItem.Row>) - Method in class com.objex.progeny.anywhere.legend.subtext.XRFSubtextLegendItem

setSubtextLegend(XRFSubtextLegend) - Method in class com.objex.progeny.anywhere.data.DataTRF

setSymbolsLegend(XRFSymbolsLegend) - Method in class com.objex.progeny.anywhere.data.DataTRF

setTableid(int) - Method in interface com.objex.progeny.anywhere.fields.XRFField

setTableid(int) - Method in class com.objex.progeny.anywhere.fields.XRFIDSDataField

setTextHeight(double) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property textHeight.

setTextWidth(double) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property textWidth.

setTextX(double) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property textX.

setTextY(double) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property textY.

setTopBar(boolean) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property topBar.

setType(String) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property type.

setType(int) - Method in class com.objex.progeny.anywhere.data.MarkerLegendItem

Set the new marker type.

setTypeid(int) - Method in class com.objex.progeny.anywhere.fields.XRFFieldType

setTypename(String) - Method in class com.objex.progeny.anywhere.fields.XRFFieldType

setValue(String) - Method in class com.objex.progeny.anywhere.data.Allele

Set the Allele value

setValueAt(int, int, XRFData, boolean) - Method in class com.objex.progeny.anywhere.fields.data.XRFTableData

Sets tha value for row (rrn) and subfield fieldid to new value of "as_value).

setWidth(double) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property width.

setWidth(int, int) - Method in class com.objex.progeny.anywhere.fields.XRFLookupTableInfo

Set the width for the specified field.

setWidth(int) - Method in class com.objex.progeny.anywhere.legend.symbols.XRFSymbolsLegend

setX(double) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property x.

setX(int) - Method in class com.objex.progeny.anywhere.legend.symbols.XRFSymbolsLegend

setXmlString(String) - Method in class com.objex.progeny.anywhere.data.DataTRF

setY(double) - Method in class com.objex.progeny.anywhere.data.Allele

Setter for property y.

setY(int) - Method in class com.objex.progeny.anywhere.legend.symbols.XRFSymbolsLegend

SPOUSE_RELATIONSHIP_STATUS - Enum in com.objex.progeny.anywhere.enums

Spouse relationships Enum

SPREADSHEET_FUDGE_FIELD - Static variable in class com.objex.progeny.anywhere.fields.XRFSystemField

state() - Method in enum com.objex.progeny.anywhere.legend.CompareOperator